The AI Revolution in Biology: From Vaccines to Protein Engineering with Amelie Schreiber
05/25/24 • 121 min
29 Listeners
In this groundbreaking episode of the Cognitive Revolution, we explore the intersection of AI and biology with expert Amelie Schreiber. Learn about the advances in drug design, protein network engineering, and the unfolding AI revolution in scientific discovery. Discover the implications for human health, longevity, and the future of biological research. Join us as we delve into an exciting conversation that may redefine our understanding of biology and medicine.
Further links :
Follow Amelie here : https://x.com/amelie_iska, https://huggingface.co/AmelieSchreiber
Read Amelie's blog here : https://huggingface.co/blog/AmelieSchreiber/protein-optimization-and-design
SPONSORS:
Oracle Cloud Infrastructure (OCI) is a single platform for your infrastructure, database, application development, and AI needs. OCI has four to eight times the bandwidth of other clouds; offers one consistent price, and nobody does data better than Oracle. If you want to do more and spend less, take a free test drive of OCI at https://oracle.com/cognitive
The Brave search API can be used to assemble a data set to train your AI models and help with retrieval augmentation at the time of inference. All while remaining affordable with developer first pricing, integrating the Brave search API into your workflow translates to more ethical data sourcing and more human representative data sets. Try the Brave search API for free for up to 2000 queries per month at https://bit.ly/BraveTCR
Head to Squad to access global engineering without the headache and at a fraction of the cost: head to https://choosesquad.com/ and mention “Turpentine” to skip the waitlist.
Omneky is an omnichannel creative generation platform that lets you launch hundreds of thousands of ad iterations that actually work customized across all platforms, with a click of a button. Omneky combines generative AI and real-time advertising data. Mention "Cog Rev" for 10% off https://www.omneky.com/
CHAPTERS:
(00:00:00) Introduction
(00:04:53) Introduction to Amelie Schreiber and the Podcast
(00:08:59) Understanding Protein Interactions
(00:11:45) Traditional Methods vs. AI Approaches
(00:13:51) Molecular Dynamics and AI Models
(00:18:02) AlphaFold and Protein Structure Prediction
(00:18:43) Sponsors: Oracle | Brave
(00:20:51) Protein Dynamics and New AI Models
(00:32:36) Sponsors: Squad | Omneky
(00:34:22) Challenges in Protein Interaction Models
(00:44:44) Generalization and Data Splitting in AI Models
(00:48:43) Advanced AI Models for Protein Complexes
(00:52:25) Practical Applications of AI in Biochemistry
(01:01:53) Designing Protein Sequences with Ligand and PNN
(01:05:19) Binder Design and Fold Conditioning
(01:08:48) Challenges and Bottlenecks in Drug Discovery
(01:16:09) Adoption and Accessibility of New Technologies
(01:21:04) Future Prospects and Ethical Considerations
(01:37:08) The Role of AI Agents in Biological Research
(01:40:18) Balancing Innovation and Safety in Biotechnology
In this groundbreaking episode of the Cognitive Revolution, we explore the intersection of AI and biology with expert Amelie Schreiber. Learn about the advances in drug design, protein network engineering, and the unfolding AI revolution in scientific discovery. Discover the implications for human health, longevity, and the future of biological research. Join us as we delve into an exciting conversation that may redefine our understanding of biology and medicine.
Further links :
Follow Amelie here : https://x.com/amelie_iska, https://huggingface.co/AmelieSchreiber
Read Amelie's blog here : https://huggingface.co/blog/AmelieSchreiber/protein-optimization-and-design
SPONSORS:
Oracle Cloud Infrastructure (OCI) is a single platform for your infrastructure, database, application development, and AI needs. OCI has four to eight times the bandwidth of other clouds; offers one consistent price, and nobody does data better than Oracle. If you want to do more and spend less, take a free test drive of OCI at https://oracle.com/cognitive
The Brave search API can be used to assemble a data set to train your AI models and help with retrieval augmentation at the time of inference. All while remaining affordable with developer first pricing, integrating the Brave search API into your workflow translates to more ethical data sourcing and more human representative data sets. Try the Brave search API for free for up to 2000 queries per month at https://bit.ly/BraveTCR
Head to Squad to access global engineering without the headache and at a fraction of the cost: head to https://choosesquad.com/ and mention “Turpentine” to skip the waitlist.
Omneky is an omnichannel creative generation platform that lets you launch hundreds of thousands of ad iterations that actually work customized across all platforms, with a click of a button. Omneky combines generative AI and real-time advertising data. Mention "Cog Rev" for 10% off https://www.omneky.com/
CHAPTERS:
(00:00:00) Introduction
(00:04:53) Introduction to Amelie Schreiber and the Podcast
(00:08:59) Understanding Protein Interactions
(00:11:45) Traditional Methods vs. AI Approaches
(00:13:51) Molecular Dynamics and AI Models
(00:18:02) AlphaFold and Protein Structure Prediction
(00:18:43) Sponsors: Oracle | Brave
(00:20:51) Protein Dynamics and New AI Models
(00:32:36) Sponsors: Squad | Omneky
(00:34:22) Challenges in Protein Interaction Models
(00:44:44) Generalization and Data Splitting in AI Models
(00:48:43) Advanced AI Models for Protein Complexes
(00:52:25) Practical Applications of AI in Biochemistry
(01:01:53) Designing Protein Sequences with Ligand and PNN
(01:05:19) Binder Design and Fold Conditioning
(01:08:48) Challenges and Bottlenecks in Drug Discovery
(01:16:09) Adoption and Accessibility of New Technologies
(01:21:04) Future Prospects and Ethical Considerations
(01:37:08) The Role of AI Agents in Biological Research
(01:40:18) Balancing Innovation and Safety in Biotechnology
Previous Episode
Claude Interpreter: Taking Safe AI to Market with Alex Albert of Anthropic
Tune in as we explore the remarkable traits of Anthropic's Claude AI with Developer Relations Lead Alex Albert. Delve into the ethical considerations, responsible development standards, and the exceptional capabilities that set Claude apart. Gather insights on the AI industry's race to the top and find out about Anthropic's upcoming releases. Whether you're an AI enthusiast or a tech-savvy developer, this podcast offers a thought-provoking discussion on the future of ethical AI.
SPONSORS:
Oracle Cloud Infrastructure (OCI) is a single platform for your infrastructure, database, application development, and AI needs. OCI has four to eight times the bandwidth of other clouds; offers one consistent price, and nobody does data better than Oracle. If you want to do more and spend less, take a free test drive of OCI at https://oracle.com/cognitive
The Brave search API can be used to assemble a data set to train your AI models and help with retrieval augmentation at the time of inference. All while remaining affordable with developer first pricing, integrating the Brave search API into your workflow translates to more ethical data sourcing and more human representative data sets. Try the Brave search API for free for up to 2000 queries per month at https://bit.ly/BraveTCR
Head to Squad to access global engineering without the headache and at a fraction of the cost: head to https://choosesquad.com/ and mention “Turpentine” to skip the waitlist.
Omneky is an omnichannel creative generation platform that lets you launch hundreds of thousands of ad iterations that actually work customized across all platforms, with a click of a button. Omneky combines generative AI and real-time advertising data. Mention "Cog Rev" for 10% off https://www.omneky.com/
CHAPTERS:
(00:00:00) Introduction
(00:06:15) Opus 3
(00:10:43) What are people not yet appreciating about the latest Claude models?
(00:16:02) Why is Claude the best writer of all the language models?
(00:18:38) Claude's subjective experience
(00:18:39) Sponsors: Oracle | Brave
(00:20:46) The moral status of Claude
(00:25:24) The testing process
(00:27:54) Anthropic's strategy
(00:31:56) Sponsors: Squad | Omneky
(00:33:42) Current state of competition
(00:36:18) Convergence at the API level
(00:42:32) Tool use
(00:46:32) Fine-tuning
(00:49:10) Best practices for app developers
(00:56:09) Jailbreaking new models
Next Episode
AI Scouting Report: NOT Investment Advice Edition
Tune in to this special episode of the Cognitive Revolution for AI scouting report. We cover the state of the art in AI applications for medicine, key AI concepts, and how these technologies could influence society.
SPONSORS:
Oracle Cloud Infrastructure (OCI) is a single platform for your infrastructure, database, application development, and AI needs. OCI has four to eight times the bandwidth of other clouds; offers one consistent price, and nobody does data better than Oracle. If you want to do more and spend less, take a free test drive of OCI at https://oracle.com/cognitive
The Brave search API can be used to assemble a data set to train your AI models and help with retrieval augmentation at the time of inference. All while remaining affordable with developer first pricing, integrating the Brave search API into your workflow translates to more ethical data sourcing and more human representative data sets. Try the Brave search API for free for up to 2000 queries per month at https://bit.ly/BraveTCR
Head to Squad to access global engineering without the headache and at a fraction of the cost: head to https://choosesquad.com/ and mention “Turpentine” to skip the waitlist.
Omneky is an omnichannel creative generation platform that lets you launch hundreds of thousands of ad iterations that actually work customized across all platforms, with a click of a button. Omneky combines generative AI and real-time advertising data. Mention "Cog Rev" for 10% off https://www.omneky.com/
RECOMMENDED PODCAST - The Riff with Byrne Hobart
Byrne Hobart, the writer of The Diff, is revered in Silicon Valley. You can get an hour with him each week. See for yourself how his thinking can upgrade yours.
Spotify: https://open.spotify.com/show/6rANlV54GCARLgMOtpkzKt
Apple: https://podcasts.apple.com/us/podcast/the-riff-with-byrne-hobart-and-erik-torenberg/id1716646486
CHAPTERS:
(00:00:00) Introduction
(00:06:13) Current State of the Art
(00:08:34) Medicine
(00:13:49) AI limitations
(00:17:01) AI capabilities
(00:17:02) Sponsors: Oracle | Brave
(00:19:09) How AI works
(00:24:05) Information processing
(00:28:51) Curated data sets
(00:32:52) Sponsors: Squad | Omneky
(00:34:38) Transformer
(00:37:11) Scaling
(00:39:59) Emergence
(00:44:03) Grokking
(00:50:30) Best practices for business
(00:53:38) Live Players
(00:58:33) What to Watch
(01:00:35) Final Thoughts
If you like this episode you’ll love
Episode Comments
Generate a badge
Get a badge for your website that links back to this episode
<a href="https://goodpods.com/podcasts/the-cognitive-revolution-ai-builders-researchers-and-live-player-analy-251008/the-ai-revolution-in-biology-from-vaccines-to-protein-engineering-with-52624928"> <img src="https://storage.googleapis.com/goodpods-images-bucket/badges/generic-badge-1.svg" alt="listen to the ai revolution in biology: from vaccines to protein engineering with amelie schreiber on goodpods" style="width: 225px" /> </a>
Copy